WebFeb 27, 2024 · CandiSNPer is a software tool that determines the LD region around a significant SNP from a genome-wide association studies (GWAS) study, and facilitates the preselection of candidate SNPs for causal variants. 21 … WebFeb 1, 2010 · CandiSNPer is a software tool that determines the LD region around a significant SNP from a GWAS. It provides a list with functional annotation and LD values for the SNPs found in the LD region.

Survey of computational haplotype determination methods for …

WebNov 26, 2024 · aov.pheno.test: anova test for phenotype based on haplotype dot-check_same_or_not: check if REF same as hap dot-colnames.mcol: change mcols data colnames dot-detect_file: detect file format for import gff or gff3 file modified based... dot-GENE_TYPES: copy from GenomicFeatures dot-getlist: get name of list dot-unlist.name: … WebJun 16, 2024 · CandiHap allows fast and robust haplotype analyses and candidate identification preselection of candidate causal SNPs and InDels from Sanger or next-generation sequencing data. Investigators can use CandiHap to specify a gene or linkage sites based on GWAS and explore favourable haplotypes of candidate genes for target … linksys model ea8500 wireless internet router

Download and Install CandiHap - ngdc.cncb.ac.cn

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